I/O functions for amplicon-data.
find_amplicons_by_primers(reference, primers) | Finds the amplicon starting and ending positions in the reference given the primers used for the experiments. |
build_amplicons_from_file(filename, ...) | Creates the Amplicons data structure from a file of reads. |
build_uniform_amplicons_from_file(filename, ...) | Creates the Amplicons data structure from a file of reads. |
write_amplicons_to_fasta(filename, amplicons) | Write amplicon sequences to file. |