List of Short Abstracts
- Ivan Kashyn, Alexander Tuzikov and Alexander Andrianov. Pharmacophore-based virtual screening of novel HIV-1 fusion inhibitors mimicking potent and broad neutralizing antibody
- Yuri Kornoushenko, Ivan Kashyn, Alexander Tuzikov and Alexander Andrianov. Computational design of entry inhibitor scaffolds targeting the third variable loop of HIV-1
- Anna Hadarovich, Ivan Anishchenko, Petras Kundrotas, Ilya Vakser and Alexander Tuzikov. A functional ontology-based score for template-based protein docking
- Vadim Demidchik, Alexander Mikhalchenko, Alexander Valvachev, Dmitriy Kolbanov, Anatoliy Sokolik, Viktor Krasnoproshin and Sergey Ablameyko. Designing the platform for phenotyping stem cuttings and clones of ornamental woody plants
- Wooyoung Kim and Lynnette Haukap. NemoProfile: effective representation for network motifs and their instances
- Forough Firoozbakht, Iman Rezaeian, Alioune Ngom and Luis Rueda. An Integrative Approach for Identification of Network Biomarkers in Breast Cancer Subtypes
- Sergei Bosiakov, Ihar Shpileuski, Denis Alekseev and Kirill Yurkevich. Web-application for assessment of load-bearing capacity of human tubular bones with surgical defect
- Neo Christopher Chung and Anna Gambin. Pattern Recognition of Chemical Fingerprints from Large-Scale Databases of Molecules and Reactions
- Yevhen Vainshtein, Karsten Rippe and Vladimir Teif. Integrative analysis of combinatorial chromatin interactions using high-throughput sequencing data
- Nikolaos Vasmatzis, Chen Wang, Sarah Kerr, Jamie Bakkum-Gamez, Flora Vaccarino and Alexej Abyzov. Sensitive detection of low frequency single nucleotides variants from amplicon and capture sequencing data with Leucippus
- Anna Dudko, Alexander Davidovskii and Valery Veresov. Integrative Atomic-Level Structure Modeling of the General Import Pore Complex
- Pavel Skums, Olga Glebova, June Zhang, Zoya Dimitrova, David S. Campo, Alex Zelikovsky and Yury Khudyakov. Accurate reconstruction of transmission history using analysis of deep sequencing data for intra-host microbial populations
- Matthew Hayes and Jeremy Pearson. A Method to Detect Large Deletions at Base Pair Level using Next-Generation Sequencing Data
- Mohammad Samiruzzaman, Costas Iliopoulos and Steven Watts. Client side web based application for search space reduction in approximate circular pattern matching
- Alper Kucukural. DEBrowser: Interactive differential expression analysis and visualization tool
- Kevin Lamkiewicz and Pedro Feijao. A Gene Family-Free model for Genome Rearrangements with Insertions and Deletions
- Zoya Dimitrova, Lilia Ganova-Raeva, Ivailo Alexiev, Lili Punkova, Amanda Sue, Pavel Teoharov, Pavel Skums and Yury Khudyakov. NGS evaluation of HCV strains from individuals co-infected with HIV
- Zoya Dimitrova, Lilia Ganova-Raeva, Amanda Sue, Pavel Skums, Natalia Saveleva and Yury Khudyakov. Studying the error for HCV amplicon sequencing with the Illumina MiSeq platform
- Takanori Hasegawa, Shuto Hayashi, Eigo Shimizu, Shinichi Mizuno, Rui Yamaguchi, Satoru Miyano, Hidewaki Nakagawa and Seiya Imoto. An in silico automated pipeline to identify tumor specic neoantigens from whole genome and exome sequencing data
- Daria Grechishnikova and Maria Poptsova. DNAStructProfiler: An automated pipeline for reconstruction of DNA/RNA secondary structures conservation profiles
- Babu Baniya, Carol Lushbough and Etienne Gnimpieba. Significance of Reduced Features for Subcellular Bioimage Classification
- Sergey Knyazev, Gaik Tamazian, Eugene Stepanov and Yuri Porozov. HIGHLIGHT: Modeling of Protein Inner-Conformation Dynamics by Solving Mass Transportation Problem
- Alexander Artyomenko, Igor Mandric, Pavel Skums, Yury Khudyakov and Alex Zelikovsky. Simulation of interaction between Intra-host viral population and immune response
- Olga Pavlova, Vladimir Malugin, Svetlana Ogurtsova, Alexander Novopolcev, Tatjana Gorbat, Maria Liventseva and Alexander Mrochek. Computer modeling of gene-gene and gene-environment interaction in essential hypertension
- Fahad Alqahtani and Ion Mandoiu. De Novo Assembly of Mitochondrial Genomes from Low Coverage Whole-Genome Sequencing Reads