hamming_distance(str1, str2) |
Calculate the Hamming distance between two strings |
mean_diversity(amp1, amp2, overlap, sample_size) |
Estimate/Compute the mean overlap diversity. |
shannon_entropy(prob_mass_map) |
Calculate the entropy of the given probability mass function. |
jensen_shannon_divergence(real, predicted) |
Quasi-metric for computing relative entropy with a midpoint. |
kullback_leibler_divergence(real, predicted) |
Relative entropy between the real frequencies and the predicted frequencies. |
root_mean_square_deviation(real, predicted) |
Root mean square deviation. |
sensitivity(real, predicted) |
Sensitivity = |True Positives| / (|True Positives| + |False Negatives|) |
positive_predictive_value(real, predicted) |
PPV = |True Positives| / (|True Positives| + |False Positives|) |