bioa.Amplicons.random_amplicons
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Generate amplicons that have uniform length and overlap. This is useful for simulated data.
reads : (str, int)
Tuple of the sequence and aligned starting position.
amplicon_len : int
The length of each amplicon.
overlap : int
How much each amplicon overlaps with its neighbors.
ref_len : int
The length of the reference genome. Reads are assumed to span the entire reference.
amplicons : Amplicons
The randomly generated amplicons.